Source: GWASDB

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs6707521
rs6707521
PLCL1
1.000 0.080 2 197848507 intron variant G/A snv 0.18
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.700 1.000 1 2012 2012
dbSNP: rs996427
rs996427
PLCL1
1.000 0.080 2 197820885 intron variant G/A snv 0.20
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.700 1.000 1 2012 2012
dbSNP: rs12500426
rs12500426
PDLIM5
0.851 0.240 4 94593458 intron variant A/C snv 0.54
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.700 1.000 1 2009 2009
dbSNP: rs17021918
rs17021918
PDLIM5
0.776 0.240 4 94641726 intron variant C/T snv 0.30
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.700 1.000 1 2009 2009
dbSNP: rs61749035
rs61749035
PCDHGA2 ; PCDHGA1
1.000 0.080 5 141339183 missense variant G/T snv 3.4E-03 1.4E-02
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.700 1.000 1 2014 2014
dbSNP: rs6880234
rs6880234
PCDHA7 ; PCDHA6 ; PCDHA5 ; PCDHA4 ; PCDHA3 ; PCDHA2 ; PCDHA1
1.000 0.080 5 140836371 missense variant C/G snv 4.4E-03 1.6E-02
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.700 1.000 1 2014 2014
dbSNP: rs113425597
rs113425597
PCDHA4 ; PCDHA3 ; PCDHA2 ; PCDHA1
1.000 0.080 5 140807616 synonymous variant G/A;C;T snv 4.0E-06; 4.4E-03; 4.0E-06
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.700 1.000 1 2014 2014
dbSNP: rs1016343
rs1016343
PCAT1 ; PRNCR1 ; CASC19 ; PCAT2
0.807 0.240 8 127081052 non coding transcript exon variant C/T snv 0.20
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.700 1.000 4 2008 2013
dbSNP: rs13252298
rs13252298
PCAT1 ; PRNCR1 ; CASC19 ; PCAT2
0.827 0.160 8 127082911 non coding transcript exon variant A/G snv 0.24
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.700 1.000 1 2013 2013
dbSNP: rs1456315
rs1456315
PCAT1 ; PRNCR1 ; CASC19
0.790 0.200 8 127091692 non coding transcript exon variant T/A;C snv
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.720 1.000 4 2010 2014
dbSNP: rs13254738
rs13254738
PCAT1 ; PRNCR1 ; CASC19
0.807 0.160 8 127092098 non coding transcript exon variant C/A;T snv
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.720 0.667 1 2008 2012
dbSNP: rs12543663
rs12543663
PCAT1 ; LOC105375751
1.000 0.080 8 126912414 intron variant C/A;T snv
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.700 1.000 1 2008 2008
dbSNP: rs16901979
rs16901979
PCAT1 ; CASC19
0.724 0.480 8 127112671 intron variant C/A snv 0.16
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.800 0.950 3 2007 2018
dbSNP: rs10505483
rs10505483
PCAT1 ; CASC19
0.925 0.080 8 127112950 intron variant C/T snv 0.16
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.700 1.000 2 2008 2012
dbSNP: rs16901966
rs16901966
PCAT1 ; CASC19
0.925 0.080 8 127098007 intron variant A/G snv 0.13
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.730 1.000 2 2008 2016
dbSNP: rs16901970
rs16901970
PCAT1 ; CASC19
1.000 0.080 8 127100470 intron variant T/G snv 0.13
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.700 1.000 2 2008 2012
dbSNP: rs7817677
rs7817677
PCAT1 ; CASC19
1.000 0.080 8 127113259 intron variant A/G snv 0.13
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.700 1.000 2 2008 2012
dbSNP: rs1378897
rs1378897
PCAT1 ; CASC19
0.925 0.080 8 127110414 intron variant C/T snv 5.7E-02
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.700 1.000 1 2012 2012
dbSNP: rs1456306
rs1456306
PCAT1 ; CASC19
0.925 0.080 8 127104255 intron variant G/A snv 0.23
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.700 1.000 1 2012 2012
dbSNP: rs6983561
rs6983561
PCAT1 ; CASC19
0.925 0.080 8 127094635 intron variant A/C snv 0.17
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.780 1.000 1 2008 2017
dbSNP: rs11672691
rs11672691
PCAT19
0.925 0.080 19 41479679 non coding transcript exon variant G/A snv 0.42
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.720 0.500 1 2013 2018
dbSNP: rs3096702
rs3096702
NOTCH4
0.925 0.080 6 32224554 upstream gene variant A/G;T snv
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.700 1.000 1 2013 2013
dbSNP: rs10993994
rs10993994
MSMB
0.763 0.280 10 46046326 5 prime UTR variant A/G snv 0.54
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.800 1.000 4 2008 2019
dbSNP: rs11568818
rs11568818
MMP7
0.763 0.280 11 102530930 upstream gene variant T/A;C snv
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.720 0.667 1 2013 2018
dbSNP: rs2292884
rs2292884
MLPH
0.925 0.080 2 237534583 missense variant A/G snv 0.28 0.34
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.710 1.000 1 2011 2011